2023

Journal articles

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Phong Quoc Nguyen, Sonia Huecas, Amna Asif-Laidin, Adrián Plaza-Pegueroles, Beatrice Capuzzi, et al.. Structural basis of Ty1 integrase tethering to RNA polymerase III for targeted retrotransposon integration. Nature Communications, 2023, 14 (1), pp.1729. ⟨10.1038/s41467-023-37109-4⟩. ⟨hal-04056067⟩

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2021

Journal articles

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Phong Quoc Nguyen, Christine Conesa, Elise Rabut, Gabriel Bragagnolo, Célia Gouzerh, et al.. Ty1 integrase is composed of an active N-terminal domain and a large disordered C-terminal module dispensable for its activity in vitro. Journal of Biological Chemistry, 2021, 297 (4), pp.101093. ⟨10.1016/j.jbc.2021.101093⟩. ⟨hal-03366187⟩

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Phong Quoc Nguyen, Christine Conesa, Elise Rabut, Gabriel Bragagnolo, Célia Gouzerh, et al.. Ty1 integrase is composed of an active N-terminal domain and a large disordered C-terminal module dispensable for its activity $in\ vitro$. Journal of Biological Chemistry, 2021, 297 (4), pp.101093. ⟨10.1016/j.jbc.2021.101093⟩. ⟨hal-03402697⟩

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Anastasia Croitoru, Morgan Babin, Hannu Myllykallio, Muriel Gondry, Alexey Aleksandrov. Cyclodipeptide Synthases of the NYH Subfamily Recognize tRNA Using an α-Helix Enriched with Positive Residues. Biochemistry, 2021, 60 (1), pp.64-76. ⟨10.1021/acs.biochem.0c00761⟩. ⟨hal-03084339⟩

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2020

Journal articles

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Fabien Le Chevalier, Isabelle Correia, Lucrèce Matheron, Morgan Babin, Mireille Moutiez, et al.. In vivo characterization of the activities of novel cyclodipeptide oxidases: new tools for increasing chemical diversity of bioproduced 2,5-diketopiperazines in Escherichia coli. Microbial Cell Factories, 2020, 19 (1), pp.178. ⟨10.1186/s12934-020-01432-y⟩. ⟨hal-03982744⟩

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Amna Asif-Laidin, Christine Conesa, Amandine Bonnet, Camille Grison, Indranil Adhya, et al.. A small targeting domain in Ty1 integrase is sufficient to direct retrotransposon integration upstream of tRNA genes. EMBO Journal, 2020, 39 (17), pp.e104337. ⟨10.15252/embj.2019104337⟩. ⟨hal-03066142⟩

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Gabrielle Bourgeois, Jérôme Seguin, Morgan Babin, Muriel Gondry, Yves Mechulam, et al.. Structural basis of the interaction between cyclodipeptide synthases and aminoacylated tRNA substrates. RNA (New York, N.Y.), 2020, ⟨10.1261/rna.075184.120⟩. ⟨hal-02907478⟩

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Camille Grison, Indranil Adhya, Rachid Menouni, Hélène Fayol, Noé Palmic, et al.. A small targeting domain in Ty1 integrase is sufficient to direct retrotransposon integration upstream of tRNA genes. EMBO Journal, 2020, pp.e104337. ⟨10.15252/embj.2019104337⟩. ⟨hal-02903063⟩

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Nicolas Canu, Mireille Moutiez, Pascal Belin, Muriel Gondry. Cyclodipeptide synthases: a promising biotechnological tool for the synthesis of diverse 2,5-diketopiperazines. Natural Product Reports, 2020, ⟨10.1039/c9np00036d⟩. ⟨hal-02415937⟩

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Nicolas Canu, Carine Tellier, Morgan Babin, Robert Thai, Inès Ajel, et al.. Flexizyme-aminoacylated shortened tRNAs demonstrate that only the aminoacylated acceptor arms of the two tRNA substrates are required for cyclodipeptide synthase activity. Nucleic Acids Research, 2020, 48 (20), ⟨10.1093/nar/gkaa903⟩. ⟨hal-02978046⟩

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Fabien Le Chevalier, Isabelle Correia, Lucrèce Matheron, Morgan Babin, Mireille Moutiez, et al.. In vivo characterization of the activities of novel cyclodipeptide oxidases: new tools for increasing chemical diversity of bioproduced 2,5-diketopiperazines in Escherichia coli. Microbial Cell Factories, 2020, 19 (1), pp.178. ⟨10.1186/s12934-020-01432-y⟩. ⟨hal-02944247⟩

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2019

Journal articles

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Pavlina Dubois, Isabelle Correia, Fabien Le Chevalier, Steven Dubois, Isabelle Jacques, et al.. Reprogramming Escherichia coli for the production of prenylated indole diketopiperazine alkaloids. Scientific Reports, 2019, 9 (1), pp.9208. ⟨10.1038/s41598-019-45519-y⟩. ⟨hal-03982770⟩

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Jerzy Witwinowski, Mireille Moutiez, Matthieu Coupet, Isabelle Correia, Pascal Belin, et al.. Study of bicyclomycin biosynthesis in Streptomyces cinnamoneus by genetic and biochemical approaches. Scientific Reports, 2019, 9 (1), pp.20226. ⟨10.1038/s41598-019-56747-7⟩. ⟨hal-03982761⟩

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Jerzy Witwinowski, Mireille Moutiez, Matthieu Coupet, Isabelle Correia, Pascal Belin, et al.. Study of bicyclomycin biosynthesis in Streptomyces cinnamoneus by genetic and biochemical approaches. Scientific Reports, 2019, 9 (1), pp.20226. ⟨10.1038/s41598-019-56747-7⟩. ⟨hal-02431235⟩

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Pavlina Dubois, Isabelle Correia, Fabien Le Chevalier, Steven Dubois, Isabelle Jacques, et al.. Author Correction: Reprogramming Escherichia coli for the production of prenylated indole diketopiperazine alkaloids. Scientific Reports, 2019, 9 (1), pp.15009. ⟨10.1038/s41598-019-51404-5⟩. ⟨hal-02321505⟩

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2018

Journal articles

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Emmanuelle Schmitt, Gabrielle Bourgeois, Muriel Gondry, Alexey Aleksandrov. Cyclization Reaction Catalyzed by Cyclodipeptide Synthases Relies on a Conserved Tyrosine Residue. Scientific Reports, 2018, 8 (1), pp.7031. ⟨10.1038/s41598-018-25479-5⟩. ⟨hal-01974171⟩

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Gabrielle Bourgeois, Jérôme Seguin, Morgan Babin, Pascal Belin, Mireille Moutiez, et al.. Structural basis for partition of the cyclodipeptide synthases into two subfamilies. Journal of Structural Biology, 2018, 203 (1), pp.17-26. ⟨10.1016/j.jsb.2018.03.001⟩. ⟨hal-01969469⟩

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Nicolas Canu, Pascal Belin, Robert Thai, Isabelle Correia, Olivier Lequin, et al.. Incorporation of Non-canonical Amino Acids into 2,5-Diketopiperazines by Cyclodipeptide Synthases. Angewandte Chemie International Edition, 2018, 57 (12), pp.3118-3122. ⟨10.1002/anie.201712536⟩. ⟨cea-01988447⟩

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Muriel Gondry, Isabelle Jacques, Robert Thai, Morgan Babin, Nicolas Canu, et al.. A Comprehensive Overview of the Cyclodipeptide Synthase Family Enriched with the Characterization of 32 New Enzymes. Frontiers in Microbiology, 2018, 9, pp.46. ⟨10.3389/fmicb.2018.00046⟩. ⟨cea-01988448⟩

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