Genome-wide supermatrix analyses of maples (Acer, Sapindaceae) reveal recurring inter-continental migration, mass extinction, and rapid lineage divergence | Areces-Berazain F, Hinsinger DD and Strijk JS | |  | | Hapo-G, haplotype-aware polishing of genome assemblies with accurate reads | | | | | Stealth Fluorescence Labeling for Live Microscopy Imaging of mRNA Delivery | Baladi T, Nilsson JR, Gallud A, Celauro E, Gasse C, Levi-Acobas F, Sarac I, Hollenstein MR, Dahlen A, Esbjorner EK and Wilhelmsson LM | | | | Telomere-to-telomere gapless chromosomes of banana using nanopore sequencing | Belser C, Baurens FC, Noel B, Martin G, Cruaud C, Istace B, Yahiaoui N, Labadie K, Hribova E, Dolezel J, Lemainque A, Wincker P, D'Hont A and Aury JM | | | | Purification and Characterization of Nit, a Robust Thermostable Nitrilase From Parabukholderia phymatum | Bessonnet T, Mariage A, Petit JL, Pellouin V, Debard A, Zaparucha A, Vergne-Vaxelaire C and de Berardinis V | | | | Change in Cofactor Specificity of Oxidoreductases by Adaptive Evolution of an Escherichia coli NADPH-Auxotrophic Strain | Bouzon M, Doring V, Dubois I, Berger A, Stoffel GMM, Ramirez LC, Meyer SN, Foure M, Roche D, Perret A, Erb TJ, Bar-Even A and Lindner SN | | | | Macroscale patterns of oceanic zooplankton composition and size structure | Brandao MC, Benedetti F, Martini S, Soviadan YD, Irisson JO, Romagnan JB, Elineau A, Desnos C, Jalabert L, Freire AS, Picheral M, Guidi L, Gorsky G, Bowler C, Karp-Boss L, Henry N, de Vargas C, Sullivan MB, Stemmann L, Lombard F and Tara Oceans Consortium C | | | | Evaluating sediment and water sampling methods for the estimation of deep-sea biodiversity using environmental DNA | Brandt MI, Pradillon F, Trouche B, Henry N, Liautard-Haag C, Cambon-Bonavita MA, Cueff-Gauchard V, Wincker P, Belser C, Poulain J, Arnaud-Haond S and Zeppilli D | | | | Bioinformatic pipelines combining denoising and clustering tools allow for more comprehensive prokaryotic and eukaryotic metabarcoding | Brandt MI, Trouche B, Quintric L, Gunther B, Wincker P, Poulain J and Arnaud-Haond S | | | | BoardION: real-time monitoring of Oxford Nanopore sequencing instruments | Bruno A, Aury JM and Engelen S | | | | Mitotic recombination between homologous chromosomes drives genomic diversity in diatoms | Bulankova P, Sekulic M, Jallet D, Nef C, van Oosterhout C, Delmont TO, Vercauteren I, Osuna-Cruz CM, Vancaester E, Mock T, Sabbe K, Daboussi F, Bowler C, Vyverman W, Vandepoele K and De Veylder L | | | | Protein Family Content Uncovers Lineage Relationships and Bacterial Pathway Maintenance Mechanisms in DPANN Archaea | Castelle CJ, Meheust R, Jaffe AL, Seitz K, Gong XZ, Baker BJ and Banfield JF | | | | Environmental vulnerability of the global ocean epipelagic plankton community interactome | Chaffron S, Delage E, Budinich M, Vintache D, Henry N, Nef C, Ardyna M, Zayed AA, Junger PC, Galand PE, Lovejoy C, Murray AE, Sarmento H, Acinas SG, Babin M, Iudicone D, Jaillon O, Karsenti E, Wincker P, Karp-Boss L, Sullivan MB, Bowler C, de Vargas C, Eveillard D and Tara Oceans C | | | | Relative Influence of Plastic Debris Size and Shape, Chemical Composition and Phytoplankton-Bacteria Interactions in Driving Seawater Plastisphere Abundance, Diversity and Activity | Cheng JG, Jacquin J, Conan P, Pujo-Pay M, Barbe V, George M, Fabre P, Bruzaud S, Ter Halle A, Meistertzheim AL and Ghiglione JF | | | | Assessing the predictive taxonomic power of the bony labyrinth 3D shape in horses, donkeys and their F1-hybrids | Clavel P, Dumoncel J, Sarkissian CD, Seguin-Orlando A, Calviere-Tonasso L, Schiavinato S, Chauvey L, Perdereau A, Aury JM, Wincker P, Onar V, Clavel B, Lepetz S, Braga J and Orlando L | | | | The NANOTUMOR consortium - Towards the Tumor Cell Atlas | Colin F, Schauer K, Hamiche A, Martineau P, Borg JP, Bednar J, Bertolin G, Camoin L, Collette Y, Dimitrov S, Fournier I, Hyenne V, Mendoza-Parra MA, Morelli X, Ronde P, Sumara I, Tramier M, Schultz P and Goetz JG | | | | Sequence-independent RNA sensing and DNA targeting by a split domain CRISPR-Cas12a gRNA switch | Collins SP, Rostain W, Liao CY and Beisel CL | | | | First Direct Evidence of Interpartner Hydride/Deuteride Exchanges for Stored Sodiated Arginine/Fructose-6-phosphate Complex Anions within Salt-Solvated Structures | Darii E, Gimbert Y, Alves S, Damont A, Perret A, Woods AS, Fenaille F and Tabet J-C | | | | Sequence diversity and evolution of a group of iflaviruses associated with ticks | Daveu R, Hervet C, Sigrist L, Sassera D, Jex A, Labadie K, Aury JM, Plantard O and Rispe C | | | | Microbiological versus Chemical Reductive Sulfidation: An Experimental and Theoretical Study | Della-Negra O, de Bonneville BL, Chaussonnerie S, Le Paslier D, Frison G and Saaidi PL | | | | A community perspective on the concept of marine holobionts: current status, challenges, and future directions | Dittami SM, Arboleda E, Auguet JC, Bigalke A, Briand E, Cardenas P, Cardini U, Decelle J, Engelen AH, Eveillard D, Gachoni CMM, Griffiths SM, Harder T, Kayal E, Kazamia E, Lathier FH, Medina M, Marzinelli EM, Morganti TM, Pons LN, Prado S, Pintado J, Saha M, selosse MA, Skillings D, Stock W, Sunagawa S, Toulza E, Vorobev A, Leblanc C and Not F | | | | Ion channel profiling of the Lymnaea stagnalis ganglia via transcriptome analysis | Dong N, Bandura J, Zhang ZL, Wang Y, Labadie K, Noel B, Davison A, Koene JM, Sun HS, Coutellec MA and Feng ZP | | | | Phylogenomic fingerprinting of tempo and functions of horizontal gene transfer within ochrophytes | Dorrell RG, Villain A, Perez-Lamarque B, de Kerdrel GA, McCallum G, Watson AK, Ait-Mohamed O, Alberti A, Corre E, Frischkorn KR, Karlusich JJP, Pelletier E, Morlon H, Bowler C and Blanc G | | | | NAD(P)H-Dependent Enzymes for Reductive Amination: Active Site Description and Carbonyl-Containing Compound Spectrum | Ducrot L, Bennett M, Grogan G and Vergne-Vaxelaire C | | | | Community-led, integrated, reproducible multi-omics with anvi'o | Eren AM, Kiefl E, Shaiber A, Veseli I, Miller SE, Schechter MS, Fink I, Pan JN, Yousef M, Fogarty EC, Trigodet F, Watson AR, Esen OC, Moore RM, Clayssen Q, Lee MD, Kivenson V, Graham ED, Merrill BD, Karkman A, Blankenberg D, Eppley JM, Sjodin A, Scott JJ, Vazquez-Campos X, McKay LJ, McDaniel EA, Stevens SLR, Anderson RE, Fuessel J, Fernandez-Guerra A, Maignien L, Delmont TO and Willis AD | | | | Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp | Farhat S, Le P, Kayal E, Noel B, Bigeard E, Corre E, Maumus F, Florent I, Alberti A, Aury JM, Barbeyron T, Cai RB, Da Silva C, Istace B, Labadie K, Marie D, Mercier J, Rukwavu T, Szymczak J, Tonon T, Alves-de-Souza C, Rouze P, van de Peer Y, Wincker P, Rombauts S, Porcel BM and Guillou L | | | | Giant viruses and the origin of eukaryotic RNA polymerases | | | | | Cyanorak v2.1: a scalable information system dedicated to the visualization and expert curation of marine and brackish picocyanobacteria genomes | Garczarek L, Guyet U, Dore H, Farrant GK, Hoebeke M, Brillet-Gueguen L, Bisch A, Ferrieux M, Siltanen J, Corre E, Le Corguille G, Ratin M, Pitt FD, Ostrowski M, Conan M, Siegel A, Labadie K, Aury JM, Wincker P, Scanlan DJ and Partensky F | | | | One Step Forward in Exploration of Class II Pyruvate Aldolases Nucleophile and Electrophile Substrate Specificity | Gastaldi C, Tagne RN, Laurent V, Helaine V, Petit JL, Traikia M, de Berardinis V, Lemaire M and Guerard-Helaine C | | | | Chromosomal scale assembly of parasitic wasp genome reveals symbiotic virus colonization | Gauthier J, Boulain H, van Vugt J, Baudry L, Persyn E, Aury JM, Noel B, Bretaudeau A, Legeai F, Warris S, Chebbi MA, Dubreuil G, Duvic B, Kremer N, Gayral P, Musset K, Josse T, Bigot D, Bressac C, Moreau S, Periquet G, Harry M, Montagne N, Boulogne I, Sabeti-Azad M, Maibeche M, Chertemps T, Hilliou F, Siaussat D, Amselem J, Luyten I, Capdevielle-Dulac C, Labadie K, Merlin BL, Barbe V, de Boer JG, Marbouty M, Consoli FL, Dupas S, Hua-Van A, Le Goff G, Bezier A, Jacquin-Joly E, Whitfield JB, Vet LEM, Smid HM, Kaiser L, Koszul R, Huguet E, Herniou EA and Drezen JM | | | | Large-scale transcriptomics to dissect 2 years of the life of a fungal phytopathogen interacting with its host plant | Gay EJ, Soyer JL, Lapalu N, Linglin J, Fudal I, Da Silva C, Wincker P, Aury JM, Cruaud C, Levrel A, Lemoine J, Delourme R, Rouxel T and Balesdent MH | | | | Biocatalysed synthesis of chiral amines: continuous colorimetric assays for mining amine-transaminases | Gourbeyre L, Heuson E, Charmantray F, Helaine V, Debard A, Petit JL, de Berardinis V and Gefflaut T | | | | Population genomics of apricots unravels domestication history and adaptive events | Groppi A, Liu S, Cornille A, Decroocq S, Bui QT, Tricon D, Cruaud C, Arribat S, Belser C, Marande W, Salse J, Huneau C, Rodde N, Rhalloussi W, Cauet S, Istace B, Denis E, Carrere S, Audergon JM, Roch G, Lambert P, Zhebentyayeva T, Liu WS, Bouchez O, Lopez-Roques C, Serre RF, Debuchy R, Tran J, Wincker P, Chen XL, Petriacq P, Barre A, Nikolski M, Aury JM, Abbott AG, Giraud T and Decroocq V | | | | VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses | Guo JR, Bolduc B, Zayed AA, Varsani A, Dominguez-Huerta G, Delmont TO, Pratama AA, Gazitua MC, Vik D, Sullivan MB and Roux S | | | | Sequencing and Chromosome-Scale Assembly of Plant Genomes, Brassica rapa as a Use Case | Istace B, Belser C, Falentin C, Labadie K, Boideau F, Deniot G, Maillet L, Cruaud C, Bertrand L, Chevre AM, Wincker P, Rousseau-Gueutin M and Aury JM | | | | Microbial Diversity and Activity During the Biodegradation in Seawater of Various Substitutes to Conventional Plastic Cotton Swab Sticks | Jacquin J, Callac N, Cheng JG, Giraud C, Gorand Y, Denoual C, Pujo-Pay M, Conan P, Meistertzheim AL, Barbe V, Bruzaud S and Ghiglione JF | | | | Eukaryotic virus composition can predict the efficiency of carbon export in the global ocean | Kaneko H, Blanc-Mathieu R, Endo H, Chaffron S, Delmont TO, Gaia M, Henry N, Hernandez-Velazquez R, Nguyen CH, Mamitsuka H, Forterre P, Jaillon O, de Vargas C, Sullivan MB, Suttle CA, Guidi L and Ogata H | | | | Global distribution patterns of marine nitrogen-fixers by imaging and molecular methods | Karlusich JJP, Pelletier E, Lombard F, Carsique M, Dvorak E, Colin S, Picheral M, Cornejo-Castillo FM, Acinas SG, Pepperkok R, Karsenti E, de Vargas C, Wincker P, Bowler C and Foster RA | | | | Discovery of Viral Myosin Genes With Complex Evolutionary History Within Plankton | Kijima S, Delmont TO, Miyazaki U, Gaia M, Endo H and Ogata H | | | | Comparative genomics reveals new functional insights in uncultured MAST species | Labarre A, Lopez-Escard D, Latorre F, Leonard G, Bucchini F, Obiol A, Cruaud C, Sieracki ME, Jaillon O, Wincker P, Vandepoele K, Logares R and Massana R | | | | Niche adaptation promoted the evolutionary diversification of tiny ocean predators | Latorre F, Deutschmann IM, Labarre A, Obiol A, Krabberod AK, Pelletier E, Sieracki ME, Cruaud C, Jaillon O, Massana R and Logares R | | | | Dual RNAseq highlights the kinetics of skin microbiome and fish host responsiveness to bacterial infection | Le Luyer J, Schull Q, Auffret P, Lopez P, Crusot M, Belliard C, Basset C, Carradec Q, Poulain J, Planes S and Saulnier D | | | | Post-translational flavinylation is associated with diverse extracytosolic redox functionalities throughout bacterial life | Meheust R, Huang S, Rivera-Lugo R, Banfield JF and Light SH | | | | Early-Life Microbial Restitution Reduces Colitis Risk Promoted by Antibiotic-Induced Gut Dysbiosis in Interleukin 10(-/-) Mice | Miyoshi J, Miyoshi S, Delmont TO, Cham C, Lee STM, Sakatani A, Yang KR, Shan Y, Kennedy M, Kiefl E, Yousef M, Crosson S, Sogin M, Antonopoulos DA, Eren AM, Leone V and Chang EB | | | | Inferring biologically relevant molecular tissue substructures by agglomerative clustering of digitized spatial transcriptomes with multilayer | Moehlin J, Mollet B, Colombo BM and Mendoza-Parra MA | | | | Segregation Distortion for Male Parents in High Density Genetic Maps from Reciprocal Crosses between Two Self-Incompatible Cultivars Confirms a Gametophytic System for Self-Incompatibility in Citrus | Ollitrault P, Ahmed D, Costantino G, Evrard JC, Cardi C, Mournet P, Perdereau A and Froelicher Y | | | | Estimating the Travel Time and the Most Likely Path from Lagrangian Drifters | O'Malley M, Sykulski AM, Laso-Jadart R and Madoui MA | | | | AI-based mobile application to fight antibiotic resistance | Pascucci M, Royer G, Adamek J, Al Asmar M, Aristizabal D, Blanche L, Bezzarga A, Boniface-Chang G, Brunner A, Curel C, Dulac-Arnold G, Fakhri RM, Malou N, Nordon C, Runge V, Samson F, Sebastian E, Soukieh D, Vert JP, Ambroise C and Madoui MA | | | | Noncanonical DNA polymerization by aminoadenine-based siphoviruses | Pezo V, Jaziri F, Bourguignon PY, Louis D, Jacobs-Sera D, Rozenski J, Pochet S, Herdewijn P, Hatfull GF, Kaminski PA and Marliere P | | | | Phylogenetic signatures of ecological divergence and leapfrog adaptive radiation in Espeletia | Pouchon C, Lavergne S, Fernandez A, Alberti A, Aubert S and Mavarez J | | | | A zero inflated log-normal model for inference of sparse microbial association networks | Prost V, Gazut S and Bruls T | | | | Genome-resolved metagenomics suggests a mutualistic relationship between Mycoplasma and salmonid hosts | Rasmussen JA, Villumsen KR, Duchene DA, Puetz LC, Delmont TO, Sveier H, Jorgensen LV, Praebel K, Martin MD, Bojesen AM, Gilbert MTP, Kristiansen K and Limborg MT | | | | Genomic signatures of clonality in the deep water kelp Laminaria rodriguezii | Reynes L, Thibaut T, Mauger S, Blanfune A, Holon F, Cruaud C, Couloux A, Valero M and Aurelle D | | | | Evolutionary origins and species delineation of the two Pyrenean endemics Campanula jaubertiana and C. andorrana (Campanulaceae): evidence for transverse alpine speciation | Roquet C, Smycka J, Alberti A, Boleda M, Coissac E, Denoeud F, Komac B, Lavergne S, Pladevall C and Saez L | | | | O-antigen targeted vaccines against E. coli may be useful in reducing morbidity, mortality and antimicrobial resistance | Royer G, Clermont O, Condamine B, Mercier-Darty M, Laouenan C, Lefort A, Denamur E, de Lastours V, Colibafi and groups S | | | | Phylogroup stability contrasts with high within sequence type complex dynamics of Escherichia coli bloodstream infection isolates over a 12-year period | Royer G, Darty MM, Clermont O, Condamine B, Laouenan C, Decousser JW, Vallenet D, Lefort A, de Lastours V, Denamur E, Grp C and Grp S | | | | Lack of association between colistin resistance and chlorhexidine reduced susceptibility in clinical isolates of Escherichia coli | Royer G, Poirel L, La Combe B, Clermont O, Chau F, Mercier-Darty M, Denamur E, Nordmann P, Ricard J-D and Decousser J-W | | | | Microdiversity of Enterococcus faecalis isolates in cases of infective endocarditis: selection of non-synonymous mutations and large deletions is associated with phenotypic modifications | Royer G, Roisin L, Demontant V, Lo S, Coutte L, Lim P, Pawlotsky JM, Jacquier H, Lepeule R, Rodriguez C and Woerther PL | | | | Microbial community structure in hadal sediments: high similarity along trench axes and strong changes along redox gradients | Schauberger C, Glud RN, Hausmann B, Trouche B, Maignien L, Poulain J, Wincker P, Arnaud-Haond S, Wenzhofer F and Thamdrup B | | | | A community resource for paired genomic and metabolomic data mining | Schorn MA, Verhoeven S, Ridder L, Huber F, Acharya DD, Aksenov AA, Aleti G, Moghaddam JA, Aron AT, Aziz S, Bauermeister A, Bauman KD, Baunach M, Beemelmanns C, Beman JM, Berlanga-Clavero MV, Blacutt AA, Bode HB, Boullie A, Brejnrod A, Bugni TS, Calteau A, Cao L, Carrion VJ, Castelo-Branco R, Chanana S, Chase AB, Chevrette MG, Costa-Lotufo LV, Crawford JM, Currie CR, Cuypers B, Dang T, de Rond T, Demko AM, Dittmann E, Du C, Drozd C, Dujardin JC, Dutton RJ, Edlund A, Fewer DP, Garg N, Gauglitz JM, Gentry EC, Gerwick L, Glukhov E, Gross H, Gugger M, Matus DGG, Helfrich EJN, Hempel BF, Hur JS, Iorio M, Jensen PR, Kang KB, Kaysser L, Kelleher NL, Kim CS, Kim KH, Koester I, Konig GM, Leao T, Lee SR, Lee YY, Li XJ, Little JC, Maloney KN, Mannle D, Martin HC, McAvoy AC, Metcalf WW, Mohimani H, Molina-Santiago C, Moore BS, Mullowney MW, Muskat M, Nothias LF, O'Neill EC, Parkinson EI, Petras D, Piel J, Pierce EC, Pires K, Reher R, Romero D, Roper MC, Rust M, Saad H, Saenz C, Sanchez LM, Sorensen SJ, Sosio M, Sussmuth RD, Sweeney D, Tahlan K, Thomson RJ, Tobias NJ, Trindade-Silva AE, van Wezel GP, Wang MX, Weldon KC, Zhang F, Ziemert N, Duncan KR, Crusemann M, Rogers S, Dorrestein PC, Medema MH and van der Hooft JJJ | | | | Massive colonization of protein-coding exons by selfish genetic elements in Paramecium germline genomes | Sellis D, Guerin F, Arnaiz O, Pett W, Lerat E, Boggetto N, Krenek S, Berendonk T, Couloux A, Aury JM, Labadie K, Malinsky S, Bhullar S, Meyer E, Sperling L, Duret L and Duharcourt S | | | | A third purine biosynthetic pathway encoded by aminoadenine-based viral DNA genomes | Sleiman D, Garcia PS, Lagune M, Loc'h J, Haouz A, Taib N, Rothlisberger P, Gribaldo S, Marliere P and Kaminski PA | | | | Chromosome-level reference genome of the soursop (Annona muricata): A new resource for Magnoliid research and tropical pomology | Strijk JS, Hinsinger DD, Roeder MM, Chatrou LW, Couvreur TLP, Erkens RHJ, Sauquet H, Pirie MD, Thomas DC and Cao KF | | | | Real-time SARS-CoV-2 diagnostic and variants tracking over multiple candidates using nanopore DNA sequencing | Studer F, Petit JL, Engelen S and Mendoza-Parra MA | | | | Male Differentiation in the Marine Copepod Oithona nana Reveals the Development of a New Nervous Ganglion and Lin12-Notch-Repeat Protein-Associated Proteolysis | Sugier K, Laso-Jadart R, Vacherie B, Kafer J, Bertrand L, Labadie K, Martins N, Orvain C, Petit E, Wincker P, Jamet JL, Alberti A and Madoui MA | | | | Nondestructive enzymatic deamination enables single-molecule long-read amplicon sequencing for the determination of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution | Sun ZY, Vaisvila R, Hussong LM, Yan B, Baum C, Saleh L, Samaranayake M, Guan SX, Dai N, Correa IR, Pradhan S, Davis TB, Evans TC and Ettwiller LM | | | | Nitrilase immobilization and transposition from a micro-scale batch to a continuous process increase the nicotinic acid productivity | Teepakorn C, Zajkoska P, Cwicklinski G, De Berardinis V, Zaparucha A, Nonglaton G and Anxionnaz-Minvielle Z | | | | Complete Genome Sequences of Two Pseudomonas Species Isolated from Marine Environments of the Pacific Ocean | Wang SZ, Cruaud C, Aury JM, Vallenet D, Poulain J, Vacherie B, Zaparucha A and Vergne-Vaxelaire C | | | | Phylogeny of the Varidnaviria Morphogenesis Module: Congruence and Incongruence With the Tree of Life and Viral Taxonomy | Woo ACC, Gaia M, Guglielmini J, Da Cunha V and Forterre P | | | | Comparative genomic analysis of obligately piezophilic Moritella yayanosii DB21MT-5 reveals bacterial adaptation to the Challenger Deep, Mariana Trench | Zhang WJ, Zhang C, Zhou SY, Li XG, Mangenot S, Fouteau S, Guerin T, Qi XQ, Yang J, Bartlett DH and Wu LF | | | | The Treasure Vault Can be Opened: Large-Scale Genome Skimming Works Well Using Herbarium and Silica Gel Dried Material | Alsos IG, Lavergne S, Merkel MKF, Boleda M, Lammers Y, Alberti A, Pouchon C, Denoeud F, Pitelkova I, Puscas M, Roquet C, Hurdu BI, Thuiller W, Zimmermann NE, Hollingsworth PM and Coissac E | | | | Plastome comparative genomics in maples resolves the infrageneric backbone relationships | Areces-Berazain F, Wang YX, Hinsinger DD and Strijk JS | | | | Genetic Analysis of Citrobacter sp.86 Reveals Involvement of Corrinoids in Chlordecone and Lindane Biotransformations | Barbance A, Della-Negra O, Chaussonnerie S, Delmas V, Muselet D, Ugarte E, Saaidi PL, Weissenbach J, Fischer C, Le Paslier D and Fonknechten N | | | | panRGP: a pangenome-based method to predict genomic islands and explore their diversity | Bazin A, Gautreau G, Medigue C, Vallenet D and Calteau A | | | | Continued Adaptation of C-4 Photosynthesis After an Initial Burst of Changes in the Andropogoneae Grasses | Bianconi ME, Hackel J, Vorontsova MS, Alberti A, Arthan W, Burke SV, Duvall MR, Kellogg EA, Lavergne S, McKain MR, Meunier A, Osborne CP, Traiperm P, Christin PA and Besnard G | | | | A comprehensive resource for retrieving, visualizing, and integrating functional genomics data | Blum M, Cholley PE, Malysheva V, Nicaise S, Moehlin J, Gronemeyer H and Mendoza-Parra MA | | | | Large scale active-learning-guided exploration for in vitro protein production optimization | Borkowski O, Koch M, Zettor A, Pandi A, Batista AC, Soudier P and Faulon JL | | | | TbD1 deletion as a driver of the evolutionary success of modern epidemic Mycobacterium tuberculosis lineages | Bottai D, Frigui W, Sayes F, Di Luca M, Spadoni D, Pawlik A, Zoppo M, Orgeur M, Khanna V, Hardy D, Mangenot S, Barbe V, Medigue C, Ma L, Bouchier C, Tavanti A, Larrouy-Maumus G and Brosch R | | | | Genome Size Variation and Comparative Genomics Reveal Intraspecific Diversity in Brassica rapa | Boutte J, Maillet L, Chaussepied T, Letort S, Aury JM, Belser C, Boideau F, Brunet A, Coriton O, Deniot G, Falentin C, Huteau V, Lode-Taburel M, Morice J, Trotoux G, Chevre AM, Rousseau-Gueutin M and de Carvalho JF | | | | An Assessment of Environmental Metabarcoding Protocols Aiming at Favoring Contemporary Biodiversity in Inventories of Deep-Sea Communities | Brandt MI, Trouche B, Henry N, Liautard-Haag C, Maignien L, de Vargas C, Wincker P, Poulain J, Zeppilli D and Arnaud-Haond S | | | | Large scale patterns of marine diatom richness: Drivers and trends in a changing ocean | Busseni G, Caputi L, Piredda R, Fremont P, Mele BH, Campese L, Scalco E, de Vargas C, Bowler C, d'Ovidio F, Zingone A, d'Alcala MR and Iudicone D | | | | Cryptic species in the parasitic Amoebophrya species complex revealed by a polyphasic approach | Cai RB, Kayal E, Alves-de-Souza C, Bigeard E, Corre E, Jeanthon C, Marie D, Porcel BM, Siano R, Szymczak J, Wolf M and Guillou L | | | | Metagenomic Mining for Amine Dehydrogenase Discovery | Caparco AA, Pelletier E, Petit JL, Jouenne A, Bommarius BR, de Berardinis V, Zaparucha A, Champion JA, Bommarius AS and Vergne-Vaxelaire C | | | | A framework for in situ molecular characterization of coral holobionts using nanopore sequencing | Carradec Q, Poulain J, Boissin E, Hume BCC, Voolstra CR, Ziegler M, Engelen S, Cruaud C, Planes S and Wincker P | | | | Characterization of Mollivirus kamchatka, the First Modern Representative of the Proposed Molliviridae Family of Giant Viruses | Christo-Foroux E, Alempic JM, Lartigue A, Santini S, Labadie K, Legendre M, Abergel C and Claverie JM | | | | Mortality in Escherichia 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